CDS

Accession Number TCMCG009C21988
gbkey CDS
Protein Id XP_030480109.1
Location complement(join(35210813..35210960,35211290..35211369,35211518..35211571,35211680..35211766,35211859..35211957,35212156..35212227,35212720..35212809,35212987..35213151,35213956..35214046,35218964..35219064,35227427..35227480,35227673..35227756,35227847..35227893,35228016..35228121,35228253..35228348,35228488..35228551,35228957..35229039,35229379..35229448,35241979..35242058,35242270..35242359,35242687..35242761,35242869..35243013,35243095..35243198))
Gene LOC115697302
GeneID 115697302
Organism Cannabis sativa

Protein

Length 694aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA560384
db_source XM_030624249.1
Definition probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X2 [Cannabis sativa]

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13117        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGCAGTTCTGGAAACCAGGGACGGAGAGGCCTAGCCTTCTAGACGACGAAGAGGGTGGAGTCCTTTTCTTTGGTGCTTCTTCTTCTTCTTCTTCTTCAGGATTTGGGTATTCGAATATCGAGAGGCAGAAGCAGAGGCTTCCGGTTTACAAGTACCGTACTGCTATCCTTTATCTGGTGGAGACACATGCTACTACCATTATTGTCGGGGAAACGGGTAGCGGCAAAACCACCCAGATACCTCAGTTCCTTAAAGAAGCGGGTTGGGCTGATGGTGGGCGTGTAATAGCATGTACACAACCAAGACGGCTGGCGGTTCAGGCTGTTTCTTCGAGGGTAGCAGAAGAAATGGGGGTGAAGCTTGGAGAGGAAGTTGGCTACACAATAAGATTTGAAGATTTTACCAAAAATGGTGTAACTATGATCAAGTTTCTCACAGATGGGGTGTTACTTAGGGAAATGATGGATGATCCTCTCCTTACAAAGTATAGTGTCATAATGGTAGATGAGGCTCATGAAAGGTCTATTTCGACTGATATTCTGTTGGGTCTCTTGAAAAAGATTCAACGAAGACGACCTGAGTTGCGTTTGGTTATCTCTTCTGCCACAATTGAAGCAAAGTCCATGTCTTCATTCTTTACCAGGCGTCGGCAAATGGAAGATGAGACTGTCGGACTAAAGATGGAGCCTGCAATCCTATCGGTGGAGGGTAGGGGCTTTACAGTACAAATCCAATATGTTGAGGAGCCTGTTTCTAATTACATCCAAGCTGCTGTTTCAACAATATTGTTGATTAATGATCAGGAGCCAATGGGAGATATTCTGGTGTTTCTTACTGGTCAAGATGATATTGATTCTGCTGTGCACTTGCTTCATGAAGATATTCAAAACCGTAGTAAAAACTCTTCAGGGTTGCTCATTTTGCCTCTATACTCTGGTCTTCCACGAGCTGAACAGGAGCTTGTGTTTGCTCCTGCTCCTAGAGGGAAGAGGAAAGTAGTGATATCAACTAATATTGCTGAGACATCTTTAACCTTGGAGGGAATTGTCTATGTTATTGATAGTGGGTTCTCAAAGCAGCGGTTCTACAATCCTATATCAGATATTGAAAATCTGGTTGTGGCACCGATATCTAAGGCTTCTGCTAGGCAAAGGGCTGGTAGGGCTGGTAGAGTTCGTCCTGGAAAATGTTACAGGTTGTATACAGAAGAGTATTTTGTCAAAGAAATGCCTAACGAGGGGATACCAGAGATTCAGAGATCTAATCTTGTTTCCTGTGTCATTCAGTTAAAATCTTTGGGAATAGATAACATACTGGGCTTTGAGTGGCCAGCATCTCCATCACCTGAAGCTATGGTTCGTGCACTTGAAGTACTTTATTCACTTGGAGTCCTGGATGATGATGCCAAACTTACTTCACCAGATGGATTTCAAGTAGCAGAGATTCCATTAGATCCAATGATTGCAAAAATGATTTTATCTTCAAGTCAACTTGGGTGTTCAGAGGAGATAATAACTATTGCTGCAGTACTTTCCATTCAATCTATCTGGGTTTCTAGTAGAGGAGCACAAAAGGAGATGGATGAGGTGAAGTTGAGATTTGCAACTGCTGAGGGTGACCATGTGACCTTCTTGAATGTGTACAAAGGATTTTTGCAGTCTGGTAAATCTTCTCAGTGGTGCTATAGGAACTTTGTTAACTATCATGCGATGAAGAAAGTGCTTGAAGTCAGAGAACAGCTCAGAAGAACAGCTCAGAGAATAGGTCTCGTTTTAAAATCCTGTGAAGGAGATATACTAATAGTCAGAAAAGCAATTACAGCTGGGTTTTTCGCAAACGCGTGTAATTTAGAGGCATACAGTCACAATGGGAAATATAAGACTATCAGAGGTTCTCAGGAAGTTTACATTCACCCCTCATCTGTGCTGTTCAGAGTTAATCCCAAATGGGTAATATATCATTCACTCGTCTCGACCGACAAGCAATACATGCGAAACGTAATCTCCATAGACCCTTCTTGGCTAAGAGAAGTTGCCCCACATTTTTACCAGCACCAGCGTCCATCTTCAATACCTCACTAA
Protein:  
MSQFWKPGTERPSLLDDEEGGVLFFGASSSSSSSGFGYSNIERQKQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQFLKEAGWADGGRVIACTQPRRLAVQAVSSRVAEEMGVKLGEEVGYTIRFEDFTKNGVTMIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLVISSATIEAKSMSSFFTRRRQMEDETVGLKMEPAILSVEGRGFTVQIQYVEEPVSNYIQAAVSTILLINDQEPMGDILVFLTGQDDIDSAVHLLHEDIQNRSKNSSGLLILPLYSGLPRAEQELVFAPAPRGKRKVVISTNIAETSLTLEGIVYVIDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYTEEYFVKEMPNEGIPEIQRSNLVSCVIQLKSLGIDNILGFEWPASPSPEAMVRALEVLYSLGVLDDDAKLTSPDGFQVAEIPLDPMIAKMILSSSQLGCSEEIITIAAVLSIQSIWVSSRGAQKEMDEVKLRFATAEGDHVTFLNVYKGFLQSGKSSQWCYRNFVNYHAMKKVLEVREQLRRTAQRIGLVLKSCEGDILIVRKAITAGFFANACNLEAYSHNGKYKTIRGSQEVYIHPSSVLFRVNPKWVIYHSLVSTDKQYMRNVISIDPSWLREVAPHFYQHQRPSSIPH